Staff Publications

Staff Publications

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    'Staff publications' is the digital repository of Wageningen University & Research

    'Staff publications' contains references to publications authored by Wageningen University staff from 1976 onward.

    Publications authored by the staff of the Research Institutes are available from 1995 onwards.

    Full text documents are added when available. The database is updated daily and currently holds about 240,000 items, of which 72,000 in open access.

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Record number 418332
Title Multi-dimensional regulation of metabolic networks shaping plant development and performance
Author(s) Kooke, R.; Keurentjes, J.J.B.
Source Journal of Experimental Botany 63 (2012)9. - ISSN 0022-0957 - p. 3353 - 3365.
DOI https://doi.org/10.1093/jxb/err373
Department(s) Laboratory of Plant Physiology
Laboratory of Genetics
EPS
Publication type Refereed Article in a scientific journal
Publication year 2012
Keyword(s) natural genetic-variation - shade-avoidance response - arabidopsis-thaliana - circadian clock - secondary metabolites - enzyme-activities - seed development - glucosinolate accumulation - carbohydrate-metabolism - laser microdissection
Abstract The metabolome is an integral part of a plant’s life cycle and determines for a large part its external phenotype. It is the final, internal product of chemical interactions, obtained through developmental, genetic, and environmental inputs, and as such, it defines the state of a plant in terms of development and performance. Understanding its regulation will provide knowledge and new insights into the biochemical pathways and genetic interactions that shape the plant and its surroundings. In this review, we will focus on four dimensions that contribute to the huge diversity of metabolomes and we will illustrate how this diversity shapes the plant in terms of development and performance: (i) temporal regulation: the metabolome is extremely dynamic and temporal changes in the environment can have an immense impact on its composition; (ii) spatial regulation: metabolites can be very specific, in both quantitative and qualitative terms, to specialized organs, tissues, and cell types; (iii) environmental regulation: the metabolic profile of plants is highly dependent on environmental signals, such as light, temperature, and nutrients, and very susceptible to biotic and abiotic stresses; and (iv) genetic regulation: the biosynthesis, structure, and accumulation of metabolites have a genetic origin, and there is quantitative and qualitative variation for metabolomes within a species. We will address the contribution of these dimensions to the wide diversity of metabolomes and highlight how the multi-dimensional regulation of metabolism defines the plant’s phenotype
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