Staff Publications

Staff Publications

  • external user (warningwarning)
  • Log in as
  • language uk
  • About

    'Staff publications' is the digital repository of Wageningen University & Research

    'Staff publications' contains references to publications authored by Wageningen University staff from 1976 onward.

    Publications authored by the staff of the Research Institutes are available from 1995 onwards.

    Full text documents are added when available. The database is updated daily and currently holds about 240,000 items, of which 72,000 in open access.

    We have a manual that explains all the features 

Record number 542367
Title Scenedesmus Obliquus UTEX393 draft genome
Author(s) Carreres, B.M.; Jaeger, L. de; Springer, J.; Barbosa, M.J.; Breuer, G.; End, E.J. van den; Kleinegris, D.M.M.; Schäffers, I.; Wolbert, E.J.H.; Zhang, H.; Lamers, P.P.; Martins dos Santos, V.A.P.; Wijffels, R.H.; Eggink, G.; Schaap, P.J.; Martens, D.E.
Department(s) Systems and Synthetic Biology
Bioprocess Engineering
BBP Bioconversion
Publication type Dataset
Publication year 2016
Keyword(s) PRJEB15865 - ERP017702 - Scenedesmus obliquus - Tetradesmus obliquus - FNXT01000000
Abstract The first draft genome of Scenedesmus obliquus (UTEX 393). The assembly yielded 9191 contigs (min length 200bp) for a total length of 96197736 bp. The scaffolding yielded 1680 sequences for a total of 126848291 bp. We were not able to recover four chromosomes and the two organelle genomes. Few scaffolds were found to cover 99.97% of the reference chloroplast genome. The mitochondrial genome was too fragmented and the scaffolds covered only 46% of UTEX78 and KS3-2.
There are no comments yet. You can post the first one!
Post a comment
Please log in to use this service. Login as Wageningen University & Research user or guest user in upper right hand corner of this page.