Staff Publications

Staff Publications

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    'Staff publications' is the digital repository of Wageningen University & Research

    'Staff publications' contains references to publications authored by Wageningen University staff from 1976 onward.

    Publications authored by the staff of the Research Institutes are available from 1995 onwards.

    Full text documents are added when available. The database is updated daily and currently holds about 240,000 items, of which 72,000 in open access.

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Communications as an important Component of the Functional Annotation of Animal Genomes (FAANG) Consortium
Groenen, M. ; Archibald, A.L. ; Tuggle, Christopher K. - \ 2016
GO-FAANG meeting : a Gathering On Functional Annotation of Animal Genomes
Tuggle, Christopher K. ; Giuffra, Elisabetta ; White, Stephen N. ; Clarke, Laura ; Zhou, Huaijun ; Ross, Pablo J. ; Acloque, Hervé ; Reecy, James M. ; Archibald, Alan ; Bellone, Rebecca R. ; Boichard, Michèle ; Chamberlain, Amanda ; Cheng, Hans ; Crooijmans, Richard P.M.A. ; Delany, Mary E. ; Finno, Carrie J. ; Groenen, Martien A.M. ; Hayes, Ben ; Lunney, Joan K. ; Petersen, Jessica L. ; Plastow, Graham S. ; Schmidt, Carl J. ; Song, Jiuzhou ; Watson, Mick - \ 2016
Animal Genetics 47 (2016)5. - ISSN 0268-9146 - p. 528 - 533.
data coordination centre (DCC) - data sharing - Genomics - metanalysis

The Functional Annotation of Animal Genomes (FAANG) Consortium recently held a Gathering On FAANG (GO-FAANG) Workshop in Washington, DC on October 7–8, 2015. This consortium is a grass-roots organization formed to advance the annotation of newly assembled genomes of domesticated and non-model organisms (www.faang.org). The workshop gathered together from around the world a group of 100+ genome scientists, administrators, representatives of funding agencies and commodity groups to discuss the latest advancements of the consortium, new perspectives, next steps and implementation plans. The workshop was streamed live and recorded, and all talks, along with speaker slide presentations, are available at www.faang.org. In this report, we describe the major activities and outcomes of this meeting. We also provide updates on ongoing efforts to implement discussions and decisions taken at GO-FAANG to guide future FAANG activities. In summary, reference datasets are being established under pilot projects; plans for tissue sets, morphological classification and methods of sample collection for different tissues were organized; and core assays and data and meta-data analysis standards were established.

Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project : open letter
Archibald, A.L. ; Bottema, C.D. ; Brauning, R. ; Burgess, S.C. ; Burt, D.W. ; Casas, E. ; Cheng, H.H. ; Clarke, L. ; Couldrey, C. ; Dalrymple, B.P. ; Elsik, C.G. ; Foissac, S. ; Giuffra, E. ; Groenen, M.A.M. ; Hayes, B.J. ; Huang, L.S. ; Khatib, H. ; Kijas, J.W. ; Kim, H. ; Lunney, J.K. ; McCarthy, F.M. ; McEwan, J. ; Moore, S. ; Nanduri, B. ; Notredame, C. ; Palti, Y. ; Plastow, G.S. ; Reecy, J.M. ; Rohrer, G. ; Sarropoulou, E. ; Schmidt, C.J. ; Silverstein, J. ; Tellam, R.L. ; Tixier-Boichard, M. ; Tosser-klopp, G. ; Tuggle, C.K. ; Vilkki, J. ; White, S.N. ; Zhao, S. ; Zhou, H. - \ 2015
Genome Biology 16 (2015). - ISSN 1474-7596 - 6 p.
We describe the organization of a nascent international effort, the Functional Annotation of Animal Genomes (FAANG) project, whose aim is to produce comprehensive maps of functional elements in the genomes of domesticated animal species.
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