Staff Publications

Staff Publications

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    'Staff publications' is the digital repository of Wageningen University & Research

    'Staff publications' contains references to publications authored by Wageningen University staff from 1976 onward.

    Publications authored by the staff of the Research Institutes are available from 1995 onwards.

    Full text documents are added when available. The database is updated daily and currently holds about 240,000 items, of which 72,000 in open access.

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Record number 477370
Title Serving many at once: How a database approach can create unity in dynamical ecosystem modelling
Author(s) Mooij, W.M.; Brederveld, R.J.; Klein, J.J.M. de; DeAngelis, D.L.; Downing, A.S.; Faber, M.; Gerla, D.J.; Hipsey, M.R.; Hoen, J. 't; Janse, J.H.; Janssen, A.B.G.; Jeuken, M.; Kooi, B.W.; Lischke, B.; Petzoldt, T.; Postma, L.; Schep, S.A.; Scholten, H.; Teurlincx, S.; Thiange, C.; Trolle, D.; Dam, A.A. van; Gerven, L.P.A. van; Nes, E.H. van; Kuiper, J.J.
Source Environmental Modelling & Software 61 (2014). - ISSN 1364-8152 - p. 266 - 273.
DOI https://doi.org/10.1016/j.envsoft.2014.04.004
Department(s) Aquatic Ecology and Water Quality Management
Aquaculture and Fisheries
Information Technology
CWC - Integrated Water Resources Management
WASS
Publication type Refereed Article in a scientific journal
Publication year 2014
Keyword(s) shallow lakes - simulation - eutrophication - management - package - pclake
Abstract Simulation modelling in ecology is a field that is becoming increasingly compartmentalized. Here we propose a Database Approach To Modelling (DATM) to create unity in dynamical ecosystem modelling with differential equations. In this approach the storage of ecological knowledge is independent of the language and platform in which the model will be run. To create an instance of the model, the information in the database is translated and augmented with the language and platform specifics. This process is automated so that a new instance can be created each time the database is updated. We describe the approach using the simple Lotka-Volterra model and the complex ecosystem model for shallow lakes PCLake, which we automatically implement in the frameworks OSIRIS, GRIND for MATLAB, ACSL, R, DUFLOW and DELWAQ. A clear advantage of working in a database is the overview it provides. The simplicity of the approach only adds to its elegance. © 2014 The Authors.
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