Staff Publications

Staff Publications

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    'Staff publications' is the digital repository of Wageningen University & Research

    'Staff publications' contains references to publications authored by Wageningen University staff from 1976 onward.

    Publications authored by the staff of the Research Institutes are available from 1995 onwards.

    Full text documents are added when available. The database is updated daily and currently holds about 240,000 items, of which 72,000 in open access.

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Record number 479402
Title Replicated high-density genetic maps of two great tit populations reveal fine-scale genomic departures from sex-equal recombination rates
Author(s) Oers, K. van; Santure, A.W.; Cauwer, I. de; Bers, N.E.M. van; Crooijmans, R.P.M.A.; Sheldon, B.C.; Visser, M.E.; Slate, J.; Groenen, M.A.M.
Source Heredity 112 (2014)3. - ISSN 0018-067X - p. 307 - 316.
DOI https://doi.org/10.1038/hdy.2013.107
Department(s) Animal Breeding and Genomics
WIAS
Publication type Refereed Article in a scientific journal
Publication year 2014
Keyword(s) wild bird population - linkage map - zebra finch - parus-major - synteny conservation - ficedula-albicollis - personality-traits - turkey genome - evolution - chicken
Abstract Linking variation in quantitative traits to variation in the genome is an important, but challenging task in the study of life-history evolution. Linkage maps provide a valuable tool for the unravelling of such trait-gene associations. Moreover, they give insight into recombination landscapes and between-species karyotype evolution. Here we used genotype data, generated from a 10k single-nucleotide polymorphism (SNP) chip, of over 2000 individuals to produce high-density linkage maps of the great tit (Parus major), a passerine bird that serves as a model species for ecological and evolutionary questions. We created independent maps from two distinct populations: a captive F2-cross from The Netherlands (NL) and a wild population from the United Kingdom (UK). The two maps contained 6554 SNPs in 32 linkage groups, spanning 2010¿cM and 1917¿cM for the NL and UK populations, respectively, and were similar in size and marker order. Subtle levels of heterochiasmy within and between chromosomes were remarkably consistent between the populations, suggesting that the local departures from sex-equal recombination rates have evolved. This key and surprising result would have been impossible to detect if only one population was mapped. A comparison with zebra finch Taeniopygia guttata, chicken Gallus gallus and the green anole lizard Anolis carolinensis genomes provided further insight into the evolution of avian karyotypes.
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