Staff Publications

Staff Publications

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    'Staff publications' is the digital repository of Wageningen University & Research

    'Staff publications' contains references to publications authored by Wageningen University staff from 1976 onward.

    Publications authored by the staff of the Research Institutes are available from 1995 onwards.

    Full text documents are added when available. The database is updated daily and currently holds about 240,000 items, of which 72,000 in open access.

    We have a manual that explains all the features 

Record number 545858
Title The antiSMASH database version 2 : a comprehensive resource on secondary metabolite biosynthetic gene clusters
Author(s) Blin, Kai; Pascal Andreu, Victòria; Los Santos, Emmanuel L.C. de; Carratore, Francesco Del; Lee, Sang Yup; Medema, Marnix H.; Weber, Tilmann
Source Nucleic acids research 47 (2019)D1. - ISSN 0305-1048 - p. D625 - D630.
DOI https://doi.org/10.1093/nar/gky1060
Department(s) Bioinformatics
Publication type Refereed Article in a scientific journal
Publication year 2019
Abstract

Natural products originating from microorganisms are frequently used in antimicrobial and anticancer drugs, pesticides, herbicides or fungicides. In the last years, the increasing availability of microbial genome data has made it possible to access the wealth of biosynthetic clusters responsible for the production of these compounds by genome mining. antiSMASH is one of the most popular tools in this field. The antiSMASH database provides pre-computed antiSMASH results for many publicly available microbial genomes and allows for advanced cross-genome searches. The current version 2 of the antiSMASH database contains annotations for 6200 full bacterial genomes and 18,576 bacterial draft genomes and is available at https://antismash-db.secondarymetabolites.org/.

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