Staff Publications

Staff Publications

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    'Staff publications' is the digital repository of Wageningen University & Research

    'Staff publications' contains references to publications authored by Wageningen University staff from 1976 onward.

    Publications authored by the staff of the Research Institutes are available from 1995 onwards.

    Full text documents are added when available. The database is updated daily and currently holds about 240,000 items, of which 72,000 in open access.

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Record number 559477
Title Unrevealing Conservation Statue of The Endangered Pygmy Hog (Procula salvania ) Using Genomic Information
Author(s) Liu, Langqing; Bosse, M.; Megens, H.J.W.C.; Groenen, M.; Madsen, O.
Event 2nd Annual Meeting of the Netherlands Society for Evolutionary Biology (NLSEB), Ede Gld, 2019-04-16/2019-04-16
Department(s) Animal Breeding and Genomics
WIAS
Publication type Poster (scientific)
Publication year 2019
Abstract Conservation breeding is becoming an increasingly important tool to prevent extinction. This by providing organisms for reintroduction to either re-establish or wild populations in their natural environment, or for assisted colonization outside of historical natural ranges by species translocation. The pygmy hog (Procula salvania) is the smallest and the rarest wild suid in the world. Once thought extinct, it has been classified as a critically endangered species according to the International Union of Conservation of Nature (IUCN) since 2008 with only a few hundred living in wild. However, little is known of the population structure of pygmy hog. Even the most fundamental aspects of population ecology, such as the effective population size, are unknown. Here, we analyzed the whole genome sequencing data of six individual pygmy hogs: three from the wild and three from a captive population to access the current and past population history of pygmy hog. First, we show that pygmy hog has remained at small population sizes with low genetic diversity since ~1 Mya. Surprisingly, mitochondrial haplotype analysis indicated that the existing populations from both wild and captivity are coming from the same maternal linage. Second, to determine the degree of inbreeding we searched the genomes for regions of homozygosity (ROHs). The ROH analysis suggests that pygmy hog has gone through past and not recent inbreeding which is in line with results from other small and inbred populations.
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