Staff Publications

Staff Publications

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    'Staff publications' is the digital repository of Wageningen University & Research

    'Staff publications' contains references to publications authored by Wageningen University staff from 1976 onward.

    Publications authored by the staff of the Research Institutes are available from 1995 onwards.

    Full text documents are added when available. The database is updated daily and currently holds about 240,000 items, of which 72,000 in open access.

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Record number 568062
Title Patterns of local, intercontinental and interseasonal variation of soil bacterial and eukaryotic microbial communities
Author(s) Gruyter, Johan De; Weedon, James T.; Bazot, Stéphane; Dauwe, Steven; Fernandez-Garberí, Pere Roc; Geisen, Stefan; La Motte, Louis Gourlez De; Heinesch, Bernard; Janssens, Ivan A.; Leblans, Niki; Manise, Tanguy; Ogaya, Romà; Löfvenius, Mikaell Ottosson; Peñuelas, Josep; Sigurdsson, Bjarni D.; Vincent, Gaëlle; Verbruggen, Erik
Source FEMS microbiology ecology 96 (2019)3. - ISSN 0168-6496
DOI https://doi.org/10.1093/femsec/fiaa018
Publication type Refereed Article in a scientific journal
Publication year 2019
Keyword(s) microbial ecology - protists - soil biogeography - soil microbial communities - spatio-temporal variability
Abstract

Although ongoing research has revealed some of the main drivers behind global spatial patterns of microbial communities, spatio-temporal dynamics of these communities still remain largely unexplored. Here, we investigate spatio-temporal variability of both bacterial and eukaryotic soil microbial communities at local and intercontinental scales. We compare how temporal variation in community composition scales with spatial variation in community composition, and explore the extent to which bacteria, protists, fungi and metazoa have similar patterns of temporal community dynamics. All soil microbial groups displayed a strong correlation between spatial distance and community dissimilarity, which was related to the ratio of organism to sample size. Temporal changes were variable, ranging from equal to local between-sample variation, to as large as that between communities several thousand kilometers apart. Moreover, significant correlations were found between bacterial and protist communities, as well as between protist and fungal communities, indicating that these microbial groups change in tandem, potentially driven by interactions between them. We conclude that temporal variation can be considerable in soil microbial communities, and that future studies need to consider temporal variation in order to reliably capture all drivers of soil microbiome changes.

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