Staff Publications

Staff Publications

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    'Staff publications' is the digital repository of Wageningen University & Research

    'Staff publications' contains references to publications authored by Wageningen University staff from 1976 onward.

    Publications authored by the staff of the Research Institutes are available from 1995 onwards.

    Full text documents are added when available. The database is updated daily and currently holds about 240,000 items, of which 72,000 in open access.

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Author Correction: Climatic controls of decomposition drive the global biogeography of forest-tree symbioses
Steidinger, B.S. ; Crowther, T.W. ; Liang, J. ; Nuland, M.E. Van; Werner, G.D.A. ; Reich, P.B. ; Nabuurs, G.J. ; de-Miguel, S. ; Zhou, M. ; Picard, N. ; Herault, B. ; Zhao, X. ; Zhang, C. ; Routh, D. ; Peay, K.G. ; Abegg, Meinrad ; Adou Yao, C.Y. ; Alberti, Giorgio ; Almeyda Zambrano, Angelica ; Alvarez-Davila, Esteban ; Alvarez-Loayza, Patricia ; Alves, Luciana F. ; Ammer, Christian ; Antón-Fernández, Clara ; Araujo-Murakami, Alejandro ; Arroyo, Luzmila ; Avitabile, Valerio ; Aymard, Gerardo ; Baker, Timothy ; Bałazy, Radomir ; Banki, Olaf ; Barroso, Jorcely ; Bastian, Meredith ; Bastin, Jean Francois ; Birigazzi, Luca ; Birnbaum, Philippe ; Bitariho, Robert ; Boeckx, Pascal ; Bongers, Frans ; Bouriaud, Olivier ; Brancalion, Pedro H.H.S. ; Decuyper, Mathieu ; Hengeveld, Geerten ; Herold, Martin ; Lu, Huicui ; Parren, Marc ; Poorter, Lourens ; Schelhaas, Mart Jan ; Sheil, Douglas ; Zagt, Roderick - \ 2019
Nature 571 (2019)7765. - ISSN 0028-0836

In this Letter, the middle initial of author G. J. Nabuurs was omitted, and he should have been associated with an additional affiliation: ‘Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, The Netherlands’ (now added as affiliation 182). In addition, the following two statements have been added to the Supplementary Acknowledgements. (1): ‘We would particularly like to thank The French NFI for the work of the many field teams and engineers, who have made extraordinary efforts to make forest inventory data publicly available.’ (1): ‘Sergio de Miguel benefited from a Serra- Húnter Fellowship provided by the Generalitat of Catalonia.’ Finally, the second sentence of the Methods section should have cited the French NFI, which provided a national forestry database used in our analysis, to read as follows: ‘The GFBi database consists of individual-based data that we compiled from all the regional and national GFBi forest-inventory datasets, including the French NFI (IGN—French National Forest Inventory, raw data, annual campaigns 2005 and following,, site accessed on 01 January 2015)’. All of these errors have been corrected online.

Prey availability and temporal partitioning modulate felid coexistence in Neotropical forests
Santos, Fernanda ; Carbone, Chris ; Wearn, Oliver R. ; Rowcliffe, J.M. ; Espinosa, Santiago ; Moreira, Marcela Guimarães ; Ahumada, Jorge A. ; Gonçalves, André Luis Sousa ; Trevelin, Leonardo C. ; Alvarez-Loayza, Patricia ; Spironello, Wilson R. ; Jansen, Patrick A. ; Juen, Leandro ; Peres, Carlos A. - \ 2019
PLoS ONE 14 (2019)3. - ISSN 1932-6203

Carnivores have long been used as model organisms to examine mechanisms that allow coexistence among ecologically similar species. Interactions between carnivores, including competition and predation, comprise important processes regulating local community structure and diversity. We use data from an intensive camera-trapping monitoring program across eight Neotropical forest sites to describe the patterns of spatiotemporal organization of a guild of five sympatric cat species: jaguar (Panthera onca), puma (Puma concolor), ocelot (Leopardus pardalis), jaguarundi (Herpailurus yagouaroundi) and margay (Leopardus wiedii). For the three largest cat species, we developed multi-stage occupancy models accounting for habitat characteristics (landscape complexity and prey availability) and models accounting for species interactions (occupancy estimates of potential competitor cat species). Patterns of habitat-use were best explained by prey availability, rather than habitat structure or species interactions, with no evidence of negative associations of jaguar on puma and ocelot occupancy or puma on ocelot occupancy. We further explore temporal activity patterns and overlap of all five felid species. We observed a moderate temporal overlap between jaguar, puma and ocelot, with differences in their activity peaks, whereas higher temporal partitioning was observed between jaguarundi and both ocelot and margay. Lastly, we conducted temporal overlap analysis and calculated species activity levels across study sites to explore if shifts in daily activity within species can be explained by varying levels of local competition pressure. Activity patterns of ocelots, jaguarundis and margays were similarly bimodal across sites, but pumas exhibited irregular activity patterns, most likely as a response to jaguar activity. Activity levels were similar among sites and observed differences were unrelated to competition or intraguild killing risk. Our study reveals apparent spatial and temporal partitioning for most of the species pairs analyzed, with prey abundance being more important than species interactions in governing the local occurrence and spatial distribution of Neotropical forest felids.

Positive biodiversity-productivity relationship predominant in global forests
Liang, J. ; Crowther, T.W. ; Picard, N. ; Wiser, S. ; Zhou, M. ; Alberti, G. ; Schulze, E.D. ; Mcguire, A.D. ; Bozzato, F. ; Pretzsch, H. ; Miguel, S. de; Paquette, A. ; Herault, B. ; Scherer-lorenzen, M. ; Barrett, C.B. ; Glick, H.B. ; Hengeveld, G.M. ; Nabuurs, Gert-Jan ; Pfautsch, S. ; Viana, H. ; Vibrans, A.C. ; Ammer, C. ; Schall, P. ; Verbyla, D. ; Tchebakova, N. ; Fischer, M. ; Watson, J.V. ; Chen, Han Y.H. ; Lei, X. ; Schelhaas, M.J. ; Lu, Huicui ; Gianelle, D. ; Parfenova, E.I. ; Salas, C. ; Lee, E. ; Lee, B. ; Kim, H.S. ; Bruelheide, H. ; Coomes, D.A. ; Piotto, D. ; Sunderland, T. ; Schmid, B. ; Gourlet-Fleury, S. ; Sonke, B. ; Tavani, R. ; Zhu, J. ; Brandl, S. ; Vayreda, J. ; Kitahara, F. ; Searle, E.B. ; Neldner, V.J. ; Ngugi, M.R. ; Baraloto, C. ; Frizzera, L. ; Ba Azy, R. ; Oleksyn, J. ; Zawila-Niedzwiecki, T. ; Bouriaud, O. ; Bussotti, F. ; Finer, L. ; Jaroszewicz, B. ; Jucker, T. ; Valladares, F. ; Jagodzinski, A.M. ; Peri, P.L. ; Gonmadje, C. ; Marthy, W. ; Obrien, T. ; Martin, E.H. ; Marshall, A.R. ; Rovero, F. ; Bitariho, R. ; Niklaus, P.A. ; Alvarez-Loayza, P. ; Chamuya, N. ; Valencia, R. ; Mortier, F. ; Wortel, V. ; Engone-Obiang, N.L. ; Ferreira, L.V. ; Odeke, D.E. ; Vasquez, R.M. ; Lewis, S.L. ; Reich, P.B. - \ 2016
Science 354 (2016)6309. - ISSN 0036-8075 - 15 p.
The biodiversity-productivity relationship (BPR) is foundational to our understanding of the global extinction crisis and its impacts on ecosystem functioning. Understanding BPR is critical for the accurate valuation and effective conservation of biodiversity. Using ground-sourced data from 777,126 permanent plots, spanning 44 countries and most terrestrial biomes, we reveal a globally consistent positive concave-down BPR, showing that continued biodiversity loss would result in an accelerating decline in forest productivity worldwide. The value of biodiversity in maintaining commercial forest productivity alone—US$166 billion to 490 billion per year according to our estimation—is more than twice what it would cost to implement effective global conservation. This highlights the need for a worldwide reassessment of biodiversity values, forest management strategies, and conservation priorities.
Standardized Assessment of Biodiversity Trends in Tropical Forest Protected Areas: The End Is Not in Sight
Beaudrot, Lydia ; Ahumada, J.A. ; O’Brien, Timothy ; Alvarez-Loayza, Patricia ; Boekee, Kelly ; Campos-Arceiz, Ahimsa ; Eichberg, David ; Espinosa, Santiago ; Fegraus, Eric ; Fletcher, Christine ; Jansen, P.A. - \ 2016
PloS Biology 14 (2016)1. - ISSN 1545-7885
Extinction rates in the Anthropocene are three orders of magnitude higher than background and disproportionately occur in the tropics, home of half the world’s species. Despite global efforts to combat tropical species extinctions, lack of high-quality, objective information on tropical biodiversity has hampered quantitative evaluation of conservation strategies. In particular, the scarcity of population-level monitoring in tropical forests has stymied assessment of biodiversity outcomes, such as the status and trends of animal populations in protected areas. Here, we evaluate occupancy trends for 511 populations of terrestrial mammals and birds, representing 244 species from 15 tropical forest protected areas on three continents. For the first time to our knowledge, we use annual surveys from tropical forests worldwide that employ a standardized camera trapping protocol, and we compute data analytics that correct for imperfect detection. We found that occupancy declined in 22%, increased in 17%, and exhibited no change in 22% of populations during the last 3–8 years, while 39% of populations were detected too infrequently to assess occupancy changes. Despite extensive variability in occupancy trends, these 15 tropical protected areas have not exhibited systematic declines in biodiversity (i.e., occupancy, richness, or evenness) at the community level. Our results differ from reports of widespread biodiversity declines based on aggregated secondary data and expert opinion and suggest less extreme deterioration in tropical forest protected areas. We simultaneously fill an important conservation data gap and demonstrate the value of large-scale monitoring infrastructure and powerful analytics, which can be scaled to incorporate additional sites, ecosystems, and monitoring methods. In an era of catastrophic biodiversity loss, robust indicators produced from standardized monitoring infrastructure are critical to accurately assess population outcomes and identify conservation strategies that can avert biodiversity collapse.
Limited carbon and biodiversity co-benefits for tropical forest mammals and birds
Beaudrot, L. ; Kroetz, K. ; Alvarez-Loayza, P. ; Amaral, I. ; Breuer, T. ; Fletcher, C.D. ; Jansen, P.A. ; Kenfack, D. ; Andelman, S. - \ 2016
Ecological Applications 26 (2016)4. - ISSN 1051-0761 - p. 1098 - 1111.
The conservation of tropical forest carbon stocks offers the opportunity to curb climate change by reducing greenhouse gas emissions from deforestation and simultaneously conserve biodiversity. However, there has been considerable debate about the extent to which carbon storage will provide benefits to biodiversity in part because whether forests that contain high carbon density in their aboveground biomass also contain high animal diversity is unknown. Here, we empirically examined medium to large bodied ground-dwelling mammal and bird (hereafter "ground-dwelling endotherm") diversity and carbon stock levels within the tropics using camera trap and vegetation data from a pantropical network of sites. Specifically, we tested whether tropical forests that stored more carbon contained higher ground-dwelling endotherm species richness, taxonomic diversity and trait diversity. We found that carbon storage was not a significant predictor for any of these three measures of diversity, which suggests that benefits for ground-dwelling endotherm diversity will not be maximized unless endotherm diversity is explicitly taken into account; prioritizing carbon storage alone will not necessarily meet biodiversity conservation goals. We recommend conservation planning that considers both objectives because there is the potential for more terrestrial endotherm diversity and carbon storage to be achieved for the same total budget if both objectives are pursued in tandem rather than independently. Tropical forests with low elevation variability and low tree density supported significantly higher ground-dwelling endotherm diversity. These tropical forest characteristics may provide more affordable proxies of ground-dwelling endotherm diversity for future multi-objective conservation planning when fine scale data on wildlife are lacking.
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