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    'Staff publications' is the digital repository of Wageningen University & Research

    'Staff publications' contains references to publications authored by Wageningen University staff from 1976 onward.

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    NEOTROPICAL XENARTHRANS: a data set of occurrence of xenarthran species in the Neotropics
    Santos, Paloma Marques ; Bocchiglieri, Adriana ; Chiarello, Adriano Garcia ; Paglia, Adriano Pereira ; Moreira, Adryelle ; Souza, Agnis Cristiane de; Abba, Agustin Manuel ; Paviolo, Agustin ; Gatica, Ailin ; Medeiro, Akyllan Zoppi ; Costa, Alan Nilo ; Gallina, Alberto Gonzalez ; Yanosky, Alberto A. ; Jesus, Alejandro ; Bertassoni, Alessandra ; Rocha, Alessandro ; Bovo, Alex Augusto Abreu ; Bager, Alex ; Mol, Alexandra Cravino ; Martensen, Alexandre Camargo ; Faustino, Alexandre Casagrande ; Lopes, Alexandre Martins Costa ; Percequillo, Alexandre Reis ; Vogliotti, Alexandre ; Keuroghlian, Alexine ; Colina, María Alicia de la; Devlin, Allison L. ; García-Olaechea, Alvaro ; Sánchez, Amadeo ; Srbek-Araujo, Ana Carolina ; Ochoa, Ana Cecilia ; Oliveira, Ana Cristina Mendes ; Lacerda, Ana Cristyna Reis ; Campelo, Ana Kellen Nogueira ; Oliveira Paschoal, Ana Maria de; Costa, Ana Raíssa Cunha ; Meiga, Ana Yoko Ykeuti ; Jesus, Anamélia Souza ; Feijó, Anderson ; Hirsch, André ; Silva, André Luiz Ferreira da; Botelho, André Luis Moura ; Regolin, André Luis ; Lanna, André Monnerat ; Nunes, André Valle ; Kindel, Andreas ; Moraes, Andreia Magro ; Gatti, Andressa ; Noss, Andrew J. ; Nobre, Andrezza Bellotto ; Montanarin, Anelise ; Deffaci, Ângela Camila ; Albuquerque, Anna Carolina Figueiredo de; Oliveira, Anne Karoline de; Mangione, Antonio Marcelo ; Pontes, Antonio Rossano Mendes ; Bertoldi, Ariane Teixeira ; Calouro, Armando Muniz ; Desbiez, Arnaud L.J. ; Fernandes, Arthur ; Ferreguetti, Atilla Colombo ; Silva, Maria Augusta Andrade da; Zimbres, Barbara ; Luciano, Beatriz Fernandes Lima ; Thoisy, Benoit de; Niebuhr, Bernardo Brandão S. ; Papi, Bernardo ; Gómez-Valencia, Bibiana ; Santos, Bráulio A. ; Lima, Breno Campelo ; Oliveira, Bruna Gomes ; Santos, Bruna Silva ; Campos, Bruno Augusto Torres Parahyba ; Leles, Bruno ; Albuquerque França, Bruno Rodrigo de; Lim, Burton ; Oliveira, Caetano Troncoso ; Cantagallo, Camila ; Lara, Camila Clozato ; Lima, Camila Silveira ; Gestich, Carla Cristina ; Melo-Soares, Carla Danielle de; Peres, Carlos A. ; Kasper, Carlos Benhur ; Candia-Gallardo, Carlos ; Angelo, Carlos De; Fragoso, Carlos Eduardo ; Freitas, Carlos Henrique de; Salvador, Carlos Henrique ; Brocardo, Carlos R. ; Melo, Carolina Depolito ; Leuchtenberger, Caroline ; Braga, Caryne ; Sánchez-Lalinde, Catalina ; Bueno, Cecília ; Luna, Cecília Licarião ; Rojano, Cesar ; Hurtado, Cindy Meliza ; Santos, Cinthya Chiva dos; Tellaeche, Cintia ; Rosa, Clarissa ; Campos, Claudia Bueno de; Silva, Cláudia Regina ; Kanda, Claudia Zukeran ; Jenkins, Clinton N. ; McDonough, Colleen ; Trinca, Cristiano Trapé ; Cunha, Cristina Jaques da; Widmer, Cynthia Elisa ; Santos, Cyntia ; Buscariol, Daiane ; Carreira, Daiane Cristina ; Carvalho, Danianderson Rodrigues ; Silva Ferraz, Daniel da; Casali, Daniel ; Thornton, Daniel ; Vasconcellos, Daniela Rodrigues ; Barcelos, Daniele ; Brown, Danielle ; Ramos, Daniella Leal ; Moreira, Danielle Oliveira ; Yogui, Débora Regina ; Faria, Deborah ; Sana, Denis Alessio ; Mattia, Denise Lidoro de; Henz, Denison José ; Friedeberg, Diana B. ; Carvalho, Diana Letícia Kruger Pacheco ; Astúa, Diego ; Queirolo, Diego ; Varela, Diego M. ; Eaton, Donald P. ; Dias, Douglas Matos ; Rivadeneira, Edgar Federico ; Rocha, Ednaldo Cândido ; Abreu-Júnior, Edson Fiedler de; Carrano, Eduardo ; Santos, Eduardo Marques ; Setz, Eleonore Zulnara Freire ; Carvalho, Elildo Alves Ribeiro ; Almeida Chiquito, Elisandra de; Matos Cardoso, Elizandra de; Mendonça, Eloisa Neves ; Bastiani, Elvira D'; Vieira, Emerson M. ; Ramalho, Emiliano Esterci ; Guijosa-Guadarrama, Emiliano ; González, Enrique ; Maggiorini, Erica Vanessa ; Fischer, Erich ; Aguiar, Erick Francisco ; Castro, Érika Paula ; Peña-Cuéllar, Erika de la; Viveiros de Castro, Ernesto B. ; Brítez, Evelyn Beatriz ; Vanderhoeven, Ezequiel Andres ; Pedó, Ezequiel ; Rocha, Fabiana Lopes ; Girardi, Fabiane ; Oliveira Roque, Fabio de; Mazim, Fábio Dias ; Barros, Fabio Monteiro de; Martello, Felipe ; Fantacini, Felipe Moreli ; Pedrosa, Felipe ; Peters, Felipe Bortolotto ; Abra, Fernanda Delborgo ; Azevedo, Fernanda Cavalcanti de; Silva Santos, Fernanda da; Silva, Fernanda Guedes da; Teixeira, Fernanda Zimmermann ; Perini, Fernando Araujo ; Passos, Fernando C. ; Carvalho, Fernando ; Azevedo, Fernando Cesar Cascelli de; Pinho, Fernando Ferreira de; Gonçalves, Fernando ; Lima, Fernando ; Contreras-Moreno, Fernando M. ; Pedroni, Fernando ; Tortato, Fernando Rodrigo ; Santos, Filipe Pereira Rego ; Caruso, Flavia ; Tirelli, Flávia Pereira ; Miranda, Flávia Regina ; Rodrigues, Flávio Henrique Guimarães ; Ubaid, Flávio Kulaif ; Palmeira, Francesca Belem Lopes ; Silva, Franciane Almeida da; Grotta-Neto, Francisco ; Souza, Franco Leandro de; Costa, Francys Emanuelle ; Pérez-Garduza, Freddy ; Delsuc, Frédéric ; Lemos, Frederico ; Pinto, Fredy Ramirez ; Boaglio, Gabriel Ivan ; Massocato, Gabriel Fávero ; Preuss, Gabriel ; Hofmann, Gabriel Selbach ; Aguiar, Gabriel Lima ; Oliveira, Gabriela Schuck ; Duarte, Gabriela Teixeira ; Beca, Gabrielle ; Giné, Gastón Andrés Fernandez ; Batista, Graziele Oliveira ; Gil, Guillermo Eduardo ; Gonsioroski, Gustavo ; Secco, Helio ; Medeiros, Hugo Reis ; Coelho, Igor Pfeifer ; Franceschi, Ingridi Camboim ; Bernardi, Itiberê ; Torre, Antonio de la; Zocche, Jairo José ; Seibert, Jardel Brandão ; Faria Falcão, Jéssica Caroline de; Dias, Jéssica Helena Mangueira ; Nodari, Joana Zorzal ; Oliveira, João Alves ; Giovanelli, João Gabriel Ribeiro ; Favoretti, João Paulo Pandini ; Polisar, John ; Sponchiado, Jonas ; Cherem, Jorge José ; Ramírez, José Fernando Moreira ; Toledo, José Julio de; Duarte, José Maurício Barbanti ; Matos, Jose Roberto de; Arrabal, Juan Pablo ; Faria Oshima, Júlia Emi de; Ribeiro, Juliana Fernandes ; Bogoni, Juliano André ; Pacheco, Julio Javier Chacón ; Schuchmann, Karl L. ; Ferraz, Katia M.P.M.B. ; Santos Everton, Laís dos; Bailey, Larissa L. ; Gonçalves, Larissa Oliveira ; Cullen, Laury ; Andrade, Layla Reis de; Trevelin, Leonardo Carreira ; Bonjorne, Lilian ; Almeida Rodrigues, Livia de; Leuzinger, Lucas ; Perillo, Lucas Neves ; Araújo, Luciana Souza ; Hufnagel, Ludmila ; Ribeiro, Ludmilla Oliveira ; Bernardo, Luis Renato Rezende ; Oliveira-Santos, Luiz Gustavo Rodrigues ; Varzinczak, Luiz Henrique ; Borges, Luiz Henrique Medeiros ; Guimarães, Luiza Neves ; Möcklinghoff, Lydia ; Oliveira, Marcela Alvares ; Magioli, Marcelo ; Assis Jardim, Márcia Maria de; Oliveira, Márcio Leite de; Tortato, Marcos Adriano ; Dums, Marcos ; Iezzi, Maria Eugenia ; Pereira, Maria João Ramos ; Jorge, Maria Luísa ; Castro Morini, Maria Santina de; Landis, Mariana Bueno ; Xavier, Mariana Sampaio ; Barros, Marília A.S. ; Silva, Marina Lima da; Rivero, Marina ; Zanin, Marina ; Marques, Marinêz Isaac ; Alves, Mario Henrique ; Bitetti, Mario S. Di; Alvarez, Martín R. ; Graipel, Maurício Eduardo ; Godoi, Mauricio Neves ; Benedetti, Maximiliano Augusto ; Beltrão, Mayara Guimarães ; Monteiro, Miguel Coutinho Moretta ; Paula, Milton José de; Perilli, Miriam Lucia Lages ; Silva, Murillo Prado da; Villar, Nacho ; Albuquerque, Natasha Moraes De; Canassa, Nathália F. ; Filho, Newton Mota ; Rosa Oliveira, Nicole da; Pasqualotto, Nielson ; Cáceres, Nilton Carlos ; Attias, Nina ; Favarini, Marina Ochoa ; Ribeiro, Otávio Santi ; Gonçalves, Pablo Rodrigues ; Rocha, Patrício Adriano da; Condé, Paula Alves ; Akkawi, Paula ; Cruz, Paula ; Lira, Paula Koeler ; Ferreira, Paula Modenesi ; Arroyo-Gerala, Paulina ; Hartmann, Paulo Afonso ; Tarso Zuquim Antas, Paulo de; Marinho, Paulo Henrique ; Faria Peres, Pedro Henrique de; Peña-Mondragón, Juan Luis ; Lombardi, Pryscilla Moura ; Souza Laurindo, Rafael de; Alves, Rafael Souza Cruz ; Grangeiro, Raissa Danielle Praxedes ; Silva, Ramon Lima ; Beltrão-Mendes, Raone ; Bonikowski, Renata Twardowsky Ramalho ; Reppucci, Juan ; Arrais, Ricardo Corassa ; Sampaio, Ricardo ; Sartorello, Ricardo ; Bovendorp, Ricardo Siqueira ; McNab, Roan ; Hack, Robson Odeli Espíndola ; Magalhães, Rodolfo Assis ; Araújo, Rodrigo Costa ; Almeida Nobre, Rodrigo de; Pérez, Rodrigo Raúl León ; Massara, Rodrigo Lima ; Paula, Rogério Cunha de; Anleu, Rony García ; Marques, Rosane Vieira ; Dornas, Rubem ; Rolim, Samir Gonçalves ; Cavalcanti, Sandra M.C. ; Lima, Saulo Ramos ; Ballari, Sebastián A. ; Santamaría, Silvia Benito ; Silva, Sofia Marques ; Age, Stefani Gabrieli ; Godim, Tayana ; Sobral-Souza, Thadeu ; Maccarini, Thiago Bernardes ; Rodrigues, Thiago Ferreira ; Piovezan, Ubiratan ; Cunha Tavares, Valéria da; Quiroga, Verónica Andrea ; Krepschi, Victor Gasperotto ; Filho, Vilmar Picinatto ; Galvão Bastazini, Vinícius Augusto ; Oliveira Gasparotto, Vinicius Peron de; Orsini, Vinicius Santana ; Guedes Layme, Viviane Maria ; Hannibal, Wellington ; Dáttilo, Wesley ; Carvalho, William Douglas de; Loughry, William James ; Blanco, Yamil Edgardo Di; Núñez-Regueiro, Mauricio M. ; Giubbina, Marina Furlan ; Passamani, Marcelo ; Alagão Querido, Luciano Carramaschi de; Costa Toledo, Gustavo Alvez da; Ribeiro, Igor Kintopp ; Quintilham, Lucas ; Bustos, Soledad de; Maza, Javier de la; Lima Neto, Jorge Ferreira ; Kossel de Andrade Silva, Katyucha Von; Sartorello, Leonardo ; Rampim, Lilian Elaine ; Marás, Gustavo A. ; Camino, Micaela ; Freitas-Junior, Mozart ; Perovic, Pablo Gaston ; Paolino, Roberta Montanheiro ; Ferreira, Scarlat Dalva ; Towns, Valeria ; Esperandio, Isadora Beraldi ; Aximoff, Izar ; Beduschi, Júlia ; Guenther, Mariana ; Cassia Bianchi, Rita de; Keuroghlian-Eaton, Sean ; Mendes, Sérgio Lucena ; Fatima Cunha, Lerrane de; Cirignoli, Sebastián ; Ciocheti, Giordano ; Prado, Helena Alves do; Fernandes-Ferreira, Hugo ; Mendes de Sena, Liana Mara ; Yamane, Marcelo Hideki ; Brennand, Pamella G.G. ; Silva, Rayana Diniz da; Escobar, Santiago ; Endo, Whaldener ; Hurtado, Rafael Reyna ; Gontijo, Nila Rássia Costa ; Marsh, Laura K. ; Severo, Magnus Machado ; Pardo, Julia Martinez ; Costa, Sebastián Andrés ; Melo, Geruza Leal ; Santana, Gindomar Gomes ; Miranda Mourão, Guilherme de; Gaspari, Gustavo Gabirele ; Duarte, Herbert ; Cabral, Hugo ; Silva, Leonardo Henrique da; Mendonça, Luana ; Barbosa, Lucas Lobo ; Santos, Manuela Vieira dos; Moraes, Marcela Figuerêdo Duarte ; Gordo, Marcelo ; Versiani, Natalia Fraguas ; Cantero, Nicolás ; Pays, Olivier ; Guedes, Patrícia Gonçalves ; Colas-Rosas, Paul François ; Ribeiro, Paulo ; Renaud, Pierre Cyril ; Hoogesteijn, Rafael Jan ; Ayala, Rodrigo ; Cunha, Rogério Grassetto Teixeira da; Schaub, Roxane ; Laurito, Sabrina ; Betkowski, Samuel Eurich ; Cortez, Sara ; Silva, Shirley Seixas Pereira ; Oliveira, Tadeu Gomes de; Spironello, Wilson Roberto ; Gengler, Nicholas ; Hidalgo, Mircea Mihart ; Juárez, Rugieri ; Iglesias, Jesús A. ; Anacleto, Teresa Cristina ; Souza Fialho, Marcos de; Cavicchioli, Guilherme ; Beccato, Maria Angélica Barbosa ; Silva, Marcelo da; Neto, Omar Correia ; Lopes, Karine Galisteo Diemer ; Godoy, Leandro Perez ; Luiz, Micheli Ribeiro ; Rojas Bonzi, Viviana B. ; Ferreira, Guilherme Braga ; Oliveira, Marcelo Juliano Rabelo ; Hinojosa, Javier ; Oliveira, Luiz Flamarion Barbosa de; Nagy-Reis, Mariana Baldy ; Ramirez, Sixto Fernández ; Concone, Henrique Villas Boas ; Mourthe, Italo ; Martínez-Lanfranco, Juan A. ; Zanoni, Juliani Bruna ; Moreira, Tainah Cruz ; Guarderas, Zoila Vega ; Bazilio, Sérgio ; Cervini, Marcelo ; Pinheiro, Marcell Soares ; Morato, Ronaldo Gonçalves ; Peroni, Nivaldo ; Trigo, Tatiane Campos ; Machado, Ricardo Bomfim ; Gaspari, Fernando ; Koenemann, Joceleia G. ; Rudolf, Juan Carlos ; Benchimol, Maíra ; Vieira, Marcus Vinícius ; Retta, Lucía Martínez ; Santiago, Pablo Gerardo Fernández ; Ciccia, Paula Gonzalez ; Estrela, Pedro Cordeiro ; Carvalho, Santiago ; Esbérard, Carlos Eduardo Lustosa ; Cruz, Yaribeth Bravata de la; Castro-Prieto, Jessica ; Braga, Ricardo Miranda ; Cartes, Jose Luis ; Andrade-Núñez, María José ; Denkiewicz, Natalia Mariana ; Falconi, Nereyda ; Pezzuti, Juarez Carlos Brito ; Castillo Cordero, Hugo Fernando del; Sousa, Luziene Conceição de; Gaspari Júnior, Roque Lázaro de; Santos-Filho, Manoel ; Almeida, Josué Santos ; Thompson, Jeffrey J. ; Santos, Juliana Silveira dos; Pereira-Ribeiro, Juliane ; Burs, Kathrin ; Silva, Kena Ferrari Moreira da; Velilla, Marianela ; Silva, Marina Xavier da; Sancha, Noé U. de la; Pinheiro, Paula Fabiana ; Castilho, Pedro Volkmer de; Bercê, William ; Assis, Julia Camara ; Tonetti, Vinicius Rodrigues ; Alves-Eigenheer, Milene ; Chinem, Simonne ; Honda, Laura K. ; Godoy Bergallo, Helena de; Alberici, Vinicius ; Wallace, Robert ; Campos Krauer, Juan Manuel ; Ribeiro, Milton Cezar ; Galetti, Mauro - \ 2019
    Ecology 100 (2019)7. - ISSN 0012-9658
    biodiversity hotspot - cingulata - forest fragmentation - habitat loss - neotropical mammals - neotropical region - pilosa - xenarthra

    Xenarthrans—anteaters, sloths, and armadillos—have essential functions for ecosystem maintenance, such as insect control and nutrient cycling, playing key roles as ecosystem engineers. Because of habitat loss and fragmentation, hunting pressure, and conflicts with domestic dogs, these species have been threatened locally, regionally, or even across their full distribution ranges. The Neotropics harbor 21 species of armadillos, 10 anteaters, and 6 sloths. Our data set includes the families Chlamyphoridae (13), Dasypodidae (7), Myrmecophagidae (3), Bradypodidae (4), and Megalonychidae (2). We have no occurrence data on Dasypus pilosus (Dasypodidae). Regarding Cyclopedidae, until recently, only one species was recognized, but new genetic studies have revealed that the group is represented by seven species. In this data paper, we compiled a total of 42,528 records of 31 species, represented by occurrence and quantitative data, totaling 24,847 unique georeferenced records. The geographic range is from the southern United States, Mexico, and Caribbean countries at the northern portion of the Neotropics, to the austral distribution in Argentina, Paraguay, Chile, and Uruguay. Regarding anteaters, Myrmecophaga tridactyla has the most records (n = 5,941), and Cyclopes sp. have the fewest (n = 240). The armadillo species with the most data is Dasypus novemcinctus (n = 11,588), and the fewest data are recorded for Calyptophractus retusus (n = 33). With regard to sloth species, Bradypus variegatus has the most records (n = 962), and Bradypus pygmaeus has the fewest (n = 12). Our main objective with Neotropical Xenarthrans is to make occurrence and quantitative data available to facilitate more ecological research, particularly if we integrate the xenarthran data with other data sets of Neotropical Series that will become available very soon (i.e., Neotropical Carnivores, Neotropical Invasive Mammals, and Neotropical Hunters and Dogs). Therefore, studies on trophic cascades, hunting pressure, habitat loss, fragmentation effects, species invasion, and climate change effects will be possible with the Neotropical Xenarthrans data set. Please cite this data paper when using its data in publications. We also request that researchers and teachers inform us of how they are using these data

    Simulated moult reduces flight performance but overlap with breeding does not affect breeding success in a long-distance migrant
    Mizumo Tomotani, Barbara ; Muijres, F.T. ; Koelman, Julia ; Casagrande, Stefania ; Visser, Marcel E. - \ 2018
    Functional Ecology 32 (2018)2. - ISSN 0269-8463 - p. 389 - 401.
    1.Long-distance migrants are time-constrained as they need to incorporate many annual cycle stages within a year. Migratory passerines moult in the short interval between breeding and migration. To widen this interval, moult may start while still breeding, but this results in flying with moulting wings when food provisioning.
    2.We experimentally simulated wing gaps in breeding male pied flycatchers by plucking two primary feathers from both wings. We quantified the nest visitations of both parents, proportion of high-quality food brought to the nestlings and adults and nestlings condition. Differences in oxidative damage caused by a possible reduction in flight efficiency were measured in amounts of ROMs and OXY in the blood. We also measured how flight performance was affected with recordings of the male`s escape flight using high-speed cameras. Finally, we collected data on adult survival, clutch size and laying date in the following year.
    3.“Plucked” males travelled a 5% shorter distance per wingbeat, showing that our treatment reduced flight performance. In line with this, “plucked” males visited their nests less often. Females of “plucked” males, however, visited the nest more often than controls, and fully compensated their partner's reduced visitation rate. As a result, there were no differences between treatments in food quality brought to the nest, adult or chick mass or number of successfully fledged chicks. Males did not differ in their oxidative damage or local survival to the following year. In contrast, females paired with plucked males tended to return less often to breed in the next year in comparison to controls, but this difference was not significant. For the birds that did return, there were no effects on breeding.
    4.Our results reveal that wing gaps in male pied flycatchers reduce their flight performance, but when it occurs during breeding they prioritise their future reproduction by reducing parental care. As a result, there is no apparent detriment to their condition during breeding. Because non-moulting females are able to compensate their partner's reduced care, there is also no immediate cost to the offspring, but females may pay the cost suffering from a reduced survival.
    Data from: Simulated moult reduces flight performance but overlap with breeding does not affect breeding success in a long-distance migrant
    Mizumo Tomotani, Barbara ; Muijres, F.T. ; Koelman, Julia ; Casagrande, Stefania ; Visser, Marcel E. - \ 2017
    NIOO-KNAW
    trade-off - pied flycatcher - high-speed camera - parental care - PIT-TAG - oxidative stress - plumage - Ficedula hypoleuca
    1. Long-distance migrants are time-constrained as they need to incorporate many annual cycle stages within a year. Migratory passerines moult in the short interval between breeding and migration. To widen this interval, moult may start while still breeding, but this results in flying with moulting wings when food provisioning. 2. We experimentally simulated wing gaps in breeding male pied flycatchers by plucking 2 primary feathers from both wings. We quantified the nest visitations of both parents, proportion of high-quality food brought to the nestlings and adults and nestlings condition. Differences in oxidative damage caused by a possible reduction in flight efficiency were measured in amounts of ROMs and OXY in the blood. We also measured how flight performance was affected with recordings of the male`s escape flight using high-speed cameras. Finally, we collected data on adult survival, clutch size and laying date in the following year. 3. “Plucked” males travelled a 5% shorter distance per wingbeat, showing that our treatment reduced flight performance. In line with this, “plucked” males visited their nests less often. Females of “plucked” males, however, visited the nest more often than controls, and fully compensated their partner’s reduced visitation rate. As a result, there were no differences between treatments in food quality brought to the nest, adult or chick mass or number of successfully fledged chicks. Males did not differ in their oxidative damage or local survival to the following year. In contrast, females paired with plucked males tended to return less often to breed in the next year in comparison to controls, but this difference was not significant. For the birds that did return there were no effects on breeding. 5. Our results reveal that wing gaps in male pied flycatchers reduce their flight performance, but when it occurs during breeding they prioritise their future reproduction by reducing parental care. As a result, there is no apparent detriment to their condition during breeding. Because non-moulting females are able to compensate their partner’s reduced care, there is also no immediate costs to the offspring, but females may pay the cost suffering from a reduced survival.
    Shallow non-inversion tillage in organic farming maintains crop yields and increases soil C stocks : a meta-analysis
    Cooper, Julia ; Baranski, Marcin ; Stewart, Gavin ; Nobel-de Lange, Majimcha ; Bàrberi, Paolo ; Fließbach, Andreas ; Peigné, Josephine ; Berner, Alfred ; Brock, Christopher ; Casagrande, Marion ; Crowley, Oliver ; David, Christophe ; Vliegher, Alex De; Döring, Thomas F. ; Dupont, Aurélien ; Entz, Martin ; Grosse, Meike ; Haase, Thorsten ; Halde, Caroline ; Hammerl, Verena ; Huiting, Hilfred ; Leithold, Günter ; Messmer, Monika ; Schloter, Michael ; Sukkel, Wijnand ; Heijden, Marcel G.A. van der; Willekens, Koen ; Wittwer, Raphaël ; Mäder, Paul - \ 2016
    Agronomy for Sustainable Development 36 (2016)1. - ISSN 1774-0746
    Conservation agriculture - Conservation tillage - Crop yield - Meta-analysis - Minimum tillage - No-till - Organic farming - Reduced tillage - Soil C - Weeds

    Reduced tillage is increasingly promoted to improve sustainability and productivity of agricultural systems. Nonetheless, adoption of reduced tillage by organic farmers has been slow due to concerns about nutrient supply, soil structure, and weeds that may limit yields. Here, we compiled the results from both published and unpublished research comparing deep or shallow inversion tillage, with various categories of reduced tillage under organic management. Shallow refers to less than 25 cm. We found that (1) division of reduced tillage practices into different classes with varying degrees of intensity allowed us to assess the trade-offs between reductions in tillage intensity, crop yields, weed incidence, and soil C stocks. (2) Reducing tillage intensity in organic systems reduced crop yields by an average of 7.6 % relative to deep inversion tillage with no significant reduction in yield relative to shallow inversion tillage. (3) Among the different classes of reduced tillage practice, shallow non-inversion tillage resulted in non-significant reductions in yield relative to deep inversion; whereas deep non-inversion tillage resulted in the largest yield reduction, of 11.6 %. (4) Using inversion tillage to only a shallow depth resulted in minimal reductions in yield, of 5.5 %, but significantly higher soil C stocks and better weed control. This finding suggests that this is a good option for organic farmers wanting to improve soil quality while minimizing impacts on yields. (5) Weeds were consistently higher, by about 50 %, when tillage intensity was reduced, although this did not always result in reduced yields.

    Extra melkpoeder in puree tegen ondervoeding ouderen
    Ziylan, Canan ; Kremer, Stefanie ; Groot, Lisette de - \ 2015
    Exploración de alternativas para el desarrollo sostenible de sistemas de producción hortícola-ganaderos familiares en el sur de Uruguay
    Aguerre, V. ; Chilibroste, P. ; Casagrande, M. ; Dogliotti, S. - \ 2014
    Agrociencia / Universidad de la Republica Uruguay, Facultad de Agronomia 18 (2014)1. - ISSN 1510-0839 - p. 24 - 40.
    La sostenibilidad de la mayoría de los predios hortícolas familiares en el sur de Uruguay está amenazada por ingresosinsuficientes y por el deterioro de los recursos naturales. En este estudio se cuantificó el efecto de la inclusión de diferentesactividades de producción ganadera en la estructura y en los resultados económico-productivos y ambientales de diferentestipos de sistemas de producción (predios) hortícolas. Se realizó un estudio exploratorio a escala predial con modelos desimulación utilizando dos predios como estudio de caso. Los resultados sugieren que la inclusión de actividades de producciónganadera en los sistemas de producción hortícolas es un factor determinante para reducir la erosión promedio del áreacultivada. Para reducir la erosión el modelo diseñó predios que reducen el área de hortalizas al tiempo que expanden larotación forrajera. Como consecuencia de esto, también se redujo el ingreso familiar (IF) entre 12 % y 31 % según el casoestudiado. Sin embargo, pudimos diseñar sistemas de producción con erosión menor a la tolerable para el tipo de suelo e IFmayor al objetivo, en los dos predios. De las actividades ganaderas evaluadas las más apropiadas para incluir en predios hortícolasson el engorde de novillos o vaquillonas en ciclos de 14 a 18 meses, debido al menor costo para reposición de animales y al menoruso de concentrados, lo que disminuye las necesidades de capital y la dependencia de insumos externos.
    Respondents' evaluation of the 24-h dietary recall method (EPIC-Soft) in the EFCOVAL Project
    Huybrechts, I. ; Geelen, A. ; Vries, J.H.M. de; Casagrande, C. ; Nicolas, G. ; Keyzer, W. de; Lillegaard, I.T.L. ; Ruprich, J. ; Lafay, L. ; Wilson-van den Hooven, E.C. ; Niekerk, E.M. ; Margaritis, I. ; Rehurkova, I. ; Crispim, S.P. ; Freisling, H. ; Henauw, S. de; Slimani, N. - \ 2011
    European Journal of Clinical Nutrition 65 (2011). - ISSN 0954-3007 - p. S29 - S37.
    multiple-pass method - validation - children - accuracy - centers
    Background: To improve participation rate, accuracy and respondents’ compliance, it is important to know the respondents’ viewpoint. Objective: To evaluate respondents’ preferences and perception about the EPIC-Soft (the software developed to conduct 24-h dietary recalls (24-HDRs) in the European Prospective Investigation into Cancer and Nutrition (EPIC) Study) 24-HDR interviews and to compare these preferences and perception between population groups (for example, between genders). Design: Data were collected in Belgium, Czech Republic, France, the Netherlands and Norway in 2007. Two 24-HDRs (face-to-face and telephone administered) were conducted using EPIC-Soft. An evaluation questionnaire on different study aspects was completed by the respondents. Setting: Data were collected in the European Food Consumption Validation Study. Subjects: A convenience sample of 600 apparently healthy men and women, 45–65 years old and including all educational levels, were recruited (120 subjects per country). Differences among population groups were compared by means of the ¿ 2-test. Results: A total of 585 respondents completed the evaluation questionnaire. In all, 88% experienced problems only to a low degree when answering face-to-face and telephone-administered 24-HDR using EPIC-Soft. A total of 15% would have preferred help of another person during the face-to-face interview in the study center (mainly men: P
    Inventory of experiences from national/regional dietary monitoring surveys using EPIC-Soft
    Huybrechts, I. ; Casagrande, C. ; Nicolas, G. ; Geelen, A. ; Crispim, S.P. ; Keyzer, W. de; Freisling, H. ; Henauw, S. de; Maeyer, M. de; Krems, C. ; Amiano, P. ; Boer, E.J. de; Ocke, M.C. ; Vries, J.H.M. de; Slimani, N. - \ 2011
    European Journal of Clinical Nutrition 65 (2011). - ISSN 0954-3007 - p. S16 - S28.
    recall - calibration - program - cancer
    Background/Objectives: The EPIC-Soft 24-h recall (the software developed to conduct 24-h dietary recalls (24-HDRs) in the European Prospective Investigation into Cancer and Nutrition (EPIC) Study) has been used in several regional/national dietary monitoring surveys. The main objective of the study was to present and discuss design, settings, logistics, data management and quality controls of dietary monitoring surveys that used EPIC-Soft for the collection of food consumption data. Subjects/Methods: Within European Food Consumption Validation (EFCOVAL), a questionnaire including questions on current/past EPIC-Soft experiences and requirements for the future was developed and sent to all institutes that used EPIC-Soft in their food consumption survey(s) (five surveys in four different countries). Results: EPIC-Soft was used in the national food consumption survey in Belgium (greater than or equal to15–97 years), Germany (14–80 years), the Netherlands (19–30 years and 2–6 years) and Spain (regional only; 4–18 years). Participation rates in these surveys were 46% (Belgium), 42% (Germany), 42% (Dutch survey in adults), 79% (Dutch survey in children) and 77% (Basque survey). Two 24-HDRs were collected by conducting face-to-face interviews in Belgium and Spain, and through telephone interviews in Germany and the Netherlands. Except the Netherlands (19–30 years), where the study was conducted only in autumn, in all other countries the study was conducted throughout the four seasons, including all days of the week. Interviews were conducted by dietitians, except in Germany and Spain. Mean EPIC-Soft interview time was 20–34¿min. The dropout rate between the first and second interviews was low (
    Potential and requirements for a standarized pan-European food consumption survey using the EPIC-Soft software
    Ocke, M.C. ; Slimani, N. ; Brants, H.A.M. ; Buurma-Rethans, E. ; Casagrande, C. ; Nicolas, G. ; Dofkova, M. ; Donne, C. le; Freisling, H. ; Geelen, A. ; Huybrechts, I. ; Keyzer, W. de; Laan, J.D. van der; Lafay, L. ; Lillegaard, I.T.L. ; Niekerk, E.M. ; Vries, J.H.M. de; Wilson-van den Hooven, E.C. ; Boer, E.J. de - \ 2011
    European Journal of Clinical Nutrition 65 (2011). - ISSN 0954-3007 - p. S48 - S57.
    24-hour diet recall - plasma carotenoids - level correlations - nutrient intake - nutrition - cancer - recommendations - questionnaires - calibration - validation
    Background/Objectives: To describe the strengths, limitations and requirements of using EPIC-Soft software (the software developed to conduct 24-h dietary recalls in the European Prospective Investigation into Cancer and Nutrition (EPIC) Study) in pan-European food consumption surveys, and to discuss potentials and barriers for a harmonized pan-European food consumption survey. Subjects/Methods: The paper is based on the experiences in the ‘European Food Consumption and Validation’ Project, which included updating six existing and preparing one new country-specific EPIC-Soft version, applying EPIC-Soft in validation and feasibility studies, and estimating the intake of nutrients and flavoring substances. The experiences were discussed in the September 2009 workshop ‘Pan-European Food Consumption Surveys—for Standardized and Comparable Transnational Data Collection’. Results: EPIC-Soft is suitable for detailed and standardized food consumption data collection in pan-European food consumption surveys. A thorough preparation of all aspects of the food consumption survey is important for the quality and efficiency during data collection and processing. The preparation and data-handling phase of working with EPIC-Soft is labor intensive and requires trained, motivated and qualified personnel. Conclusions: Given the suitability of EPIC-Soft as standardized dietary assessment tool in European dietary monitoring, the proposed strategy toward a pan-European food consumption survey is to prepare well, to allow flexibility in national extensions and to start with a limited number of countries that are interested
    The standardized computerized 24-h dietary recall method EPIC-Soft adapted for pan-European dietary monitoring
    Slimani, N. ; Casagrande, C. ; Nicolas, G. ; Freisling, H. ; Huybrechts, I. ; Ocke, M.C. ; Niekerk, E.M. ; Rossum, C. van; Bellemans, M. ; Maeyer, M. de; Lafay, L. ; Krems, C. ; Amiano, P. ; Trolle, E. ; Geelen, A. ; Vries, J.H.M. de; Boer, E.J. de - \ 2011
    European Journal of Clinical Nutrition 65 (2011)S1. - ISSN 0954-3007 - p. S5 - S15.
    nutrition - cancer - calibration - project - validation - rationale - countries - nitrogen - centers - program
    Background/Objectives: The EPIC-Soft program (the software initially developed to conduct 24-h dietary recalls (24-HDRs) in the European Prospective Investigation into Cancer and Nutrition (EPIC) Study) was recommended as the best way to standardize 24-HDRs for future pan-European dietary monitoring. Within European Food Consumption Validation (EFCOVAL), EPIC-Soft was adapted and further developed on various aspects that were required to optimize its use. In this paper, we present the structure and main interview steps of the EPIC-Soft program, after implementation of a series of new specifications deemed to satisfy specific requirements of pan-European monitoring surveys and other international studies. Subjects/Methods: Updates to optimize the EPIC-Soft program were ascertained according to the following stepwise approach: (1) identification of requested specifications to be potentially implemented through an ad hoc ‘EPIC-Soft specifications questionnaire’ sent to past, current and possible future users of the software; (2) evaluation of the specifications in collaboration with two ad hoc task force groups and through a workshop; (3) development of a technical solution for each retained specification; (4) implementation of the specifications by software developers; (5) testing and amendment of bugs. Results: A number of new specifications and facilities were implemented to EPIC-Soft program. In addition, the software underwent a full reprogramming and migration to a modern Windows environment, including changes in its internal architecture and user interface. Although the overall concept and structure of the initial software were not changed substantially, these improvements ease the current and future use of EPIC-Soft and increase further its adaptation to other countries and study contexts. Conclusions: EPIC-Soft is enriched with further functions and facilities expected to fulfil specific needs of pan-European dietary monitoring and risk assessment purposes. The validity, feasibility and relevance of this software for different national and international study designs, and the logistical aspects related to its implementation are reported elsewhere.
    The benefits of using quantile regression for analysing the effect of weeds on organic winter wheat
    Casagrande, M. ; Makowski, D. ; Jeuffroy, M.H. ; Valantin-Morison, M. ; David, C. - \ 2010
    Weed Research 50 (2010)3. - ISSN 0043-1737 - p. 199 - 208.
    yield loss - management - crop - systems - competition - diversity - density - fields - maize - model
    P>In organic farming, weeds are one of the threats that limit crop yield. An early prediction of weed effect on yield loss and the size of late weed populations could help farmers and advisors to improve weed management. Numerous studies predicting the effect of weeds on yield have already been conducted, but the level of uncertainty about weed effect is expected to be very high in organic crops. It is thus more appropriate to provide farmers and advisors with distributions of possible production levels, rather than with point values. The purpose of this study was to estimate the effect of early weed density at the end of the tillering stage of organic winter wheat on subsequent yield and on late weed density at flowering, by using quantile regression. Results showed that this method can be applied to a hyperbolic model and to an allometric density-dependent model, to describe the distribution of yield values and of late weed density respectively, as functions of early weed density measurements. Mechanical weed control showed no significant effect on the relationship between early weed density and grain yield, but it decreased late weed density. Yield and late weed density distributions derived by quantile regression provided sound information on the possible effect of weeds on organic winter wheat production.
    Sustainable futures for vegetable family farmers in Uruguay: a model-based exploration
    Casagrande, M. ; Dogliotti, S. ; Groot, J.C.J. ; Aguerre, V. ; Abbas, A. ; Albín, A. ; Claassen, F. ; Chilibroste, P. ; Rossing, W.A.H. - \ 2010
    In: Proceedings of ‘Agro2010 the XIth ESA Congress’, Montpellier, France, 29 August - 03 September, 2010. - Montpellier, France : - p. 407 - 408.
    Exploring options for sustainable farming systems development for vegetable family farmers in Uruguay using a modeling toolkit
    Casagrande, M. ; Dogliotti, S. ; Groot, J.C.J. ; Aguerre, V. ; Abbas, A. ; Albin, A. ; Claassen, G.D.H. ; Chilibroste, P. ; Rossing, W.A.H. - \ 2010
    In: Building sustainable rural futures. The added value of systems approaches in times of change and uncertainty, Vienna, Austria, 04 - 07 July, 2010. - Vienna : University of Natural Resources and Applied Life Sciences - ISBN 9783200019089 - p. 463 - 469.
    Economic and environmental sustainability of family-based vegetable production systems in south Uruguay are seriously compromised after two decades of net decreasing prices and strategies based on specialization and intensification. This paper presents a model-based exploration of alternative livelihood strategies in terms of income generation and resource use, under three different future scenarios defined by local experts. We designed new production activities (rotation and animal productions), evaluated them with economical and environmental indicators and finally combined them at farm-scale to elucidate win-win situations and tradeoffs. Results were used for defining policy briefs to support ongoing local innovation processes
    Factors limiting the grain protein content of organic winter wheat in south-eastern France: a mixed-model approach
    Casagrande, M. ; David, C. ; Valantin-Morison, M. ; Makowski, D. ; Jeuffroy, M.H. - \ 2009
    Agronomy for Sustainable Development 29 (2009)4. - ISSN 1774-0746 - p. 565 - 574.
    nitrogen-fertilizer - farming systems - weed management - yield - crop - input - sustainability - number
    Organic agriculture could achieve the objectives of sustainable agriculture by banning the use of synthetic fertilizers and pesticides. However, organic crops generally show lower performances than conventional ones. In France, organic winter wheat production is characterized by low grain protein content. There is a crucial need for better understanding the variability of grain protein content, because millers require batches with values over 10.5% of dry matter. Here, a regional agronomic diagnosis was carried out to identify the limiting factors and crop management practices explaining the variability of grain protein content. The studied field network was a set of 51 organic winter wheat plots in south-eastern France. The mixed-model method was used for identifying and ranking the limiting factors and the crop management practices responsible for variation in limiting factors. Our results show that the grain protein content variation was mostly explained by the baking quality grade of the cultivar, crop nitrogen status and weed density at flowering. There was a positive correlation between grain protein content and both crop nitrogen status and weed density. To a lesser extent, climatic factors also explained grain protein content variability. A lower water stress increased grain protein content, whereas an increase in the photothermal quotient and daily temperature over 25 degrees C reduced grain protein content. In south-eastern France, grain protein content of organic winter wheat could be increased by improving fertilization management, using an improved baking quality grade cultivar, choosing a legume fodder crop as preceding crop, or by avoiding late sowing dates.
    Preliminary Investigations on Salmonella spp. Incidence in Meat Chicken Farms in Italy, Germany, Lithuania and the Netherlands
    Pieskus, J. ; Franciosini, M.P. ; Casagrande Proietti, P. ; Reich, F. ; Kazeniauskas, E. ; Butrimaite-Ambrozeviciene, C. ; Mauricas, M. ; Bolder, N.M. - \ 2008
    International Journal of Poultry Science 7 (2008)8. - ISSN 1682-8356 - p. 813 - 817.
    The broiler chickens, especially if intensively reared, can be considered as an important reservoir of Salmonella infections in humans. Many consumers assume that broiler chickens, grown under conventional commercial conditions, have higher infection levels of Salmonella than free-range organic chickens. The subject of this study was firstly to assess the incidence of Salmonella spp. In conventional chicken farms, located in different areas of Italy, Germany, Lithuania and in the Netherlands. In addition organic farms were investigated both in Italy and the Netherlands. The typification of Salmonella was also effected in attempt to value the distribution of the organism on the basis of the different geographical areas. The incidence of Salmonella in ¿conventional¿ broiler farms was 29% in Lithuania, 20% in Italy and 11% in The Netherlands, while in Germany Salmonella was not detected. Salmonella was isolated from organic broiler flocks in Italy (18, 1%) and in The Netherlands (3, 7%). Our results indicated that Salmonella Enteritidis and Salmonella Typhimurium dominated in Lithuanian broiler flocks while Salmonella Infantis and Salmonella Java were predominant in the Netherlands. Salmonella hadar and Salmonella heidelberg seemed to be prevalent in Italy.
    European Prospective Investigation into Cancer and Nutrition (EPIC) calibration study: rationale, design and population characteristics
    Slimani, N. ; Kaaks, R. ; Ferrari, P. ; Casagrande, C. ; Clavel-Chapelon, F. ; Lotze, G. ; Kroke, A. ; Trichopoulos, D. ; Trichopoulou, A. ; Lauria, C. ; Bellegotti, M. ; Ocké, M.C. ; Peeters, P.H.M. ; Engeset, D. ; Lund, E. ; Agudo, A. ; Larranaga, N. ; Mattisson, I. ; Andren, C. ; Johansson, I. ; Davey, G. ; Welch, A.A. ; Overvad, K. ; Tjonneland, A. ; Staveren, W.A. van; Saracci, R. ; Riboli, E. - \ 2002
    Public Health Nutrition 5 (2002)6B. - ISSN 1368-9800 - p. 1125 - 1145.
    dietary-intake measurements - multicenter cohort - measurement error - relative risk - questionnaire - validity - food
    The European Prospective Investigation into Cancer and Nutrition (EPIC), which covers a large cohort of half a million men and women from 23 European centres in 10 Western European countries, was designed to study the relationship between diet and the risk of chronic diseases, particularly cancer. Information on usual individual dietary intake was assessed using different validated dietary assessment methods across participating countries. In order to adjust for possible systematic over- or underestimation in dietary intake measurements and correct for attenuation bias in relative risk estimates, a calibration approach was developed. This approach involved an additional dietary assessment common across study populations to re-express individual dietary intakes according to the same reference scale. A single 24-hour diet recall was therefore collected, as the EPIC reference calibration method, from a stratified random sample of 36 900 subjects from the entire EPIC cohort, using a software program (EPIC-SOFT) specifically designed to standardise the dietary measurements across study populations. This paper describes the design and populations of the calibration sub-studies set up in the EPIC centres. In addition, to assess whether the calibration sub-samples were representative of the entire group of EPIC cohorts, a series of subjects' characteristics known possibly to influence dietary intakes was compared in both population groups. This was the first time that calibration sub-studies had been set up in a large multi-centre European study. These studies showed that, despite certain inherent methodological and logistic constraints, a study design such as this one works relatively well in practice. The average response in the calibration study was 78.3% and ranged from 46.5% to 92.5%. The calibration population differed slightly from the overall cohort but the differences were small for most characteristics and centres. The overall results suggest that, after adjustment for age, dietary intakes estimated from calibration samples can reasonably be interpreted as representative of the main cohorts in most of the EPIC centres.
    Geographic diversity of the Colorado potato beetle and its infestation in Eurasia
    Wilde, J. de; Hsiao, T.H. - \ 1981
    In: Advances in Potato Pest Management / Lashomb, J.H., Casagrande, R., Stroudsburg, PA : Hutchinson Ross Publishing Co. - ISBN 9780879334079 - p. 47 - 68.
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